euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

170 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip326 chr1 40380194 40380194 - unknown germline . no 246 .
srip603 chr1 46453454 46453454 - unknown germline . no 246 MAST2
srip2273 chr1 89321975 89321975 + unknown germline . no 246 GTF2B
srip2879 chr1 102000826 102000826 + unknown germline . no 246 .
srip4130 chr1 149308428 149308428 + unknown germline . no 246 LOC645262
srip5256 chr1 176960583 176960583 . unknown germline . no 246 ASTN1
srip7072 chr1 229337133 229337133 . unknown germline . no 246 .
srip8449 chr10 25707693 25707693 - unknown germline . no 246 GPR158
srip8833 chr10 42797340 42797340 . unknown germline . no 246 .
srip9661 chr10 73292481 73292481 - unknown germline . no 246 CDH23
srip10669 chr10 95334377 95334377 . unknown germline . no 246 O3FAR1
srip10875 chr10 108993649 108993649 . unknown germline . no 246 .
srip12274 chr11 9906811 9906811 + unknown germline . no 246 SBF2
srip13825 chr11 33670130 33670130 + unknown germline . no 246 C11orf41
srip13938 chr11 38327584 38327584 + unknown germline . no 246 .
srip14576 chr11 48360587 48360587 - unknown germline . no 246 .
srip15001 chr11 50399973 50399973 - unknown germline . no 246 .
srip15382 chr11 58171843 58171843 + unknown germline . no 246 .
srip15840 chr11 63451623 63451623 - unknown germline . no 246 RTN3
srip17168 chr11 94684368 94684368 + unknown germline . no 246 .
srip18132 chr11 111082407 111082407 . unknown germline . no 246 .
srip18245 chr11 113995272 113995272 + unknown germline . no 246 ZBTB16
srip18348 chr11 121131527 121131527 . unknown germline . no 246 .
srip19270 chr11 134305645 134305645 - unknown germline . no 246 .
srip19906 chr12 11219195 11219195 - unknown germline . no 246 PRH1-PRR4
srip20751 chr12 28226420 28226420 - unknown germline . no 246 .
srip21731 chr12 34846714 34846714 . unknown germline . no 246 .
srip22217 chr12 43256979 43256979 - unknown germline . no 246 .
srip23144 chr12 66451452 66451452 - unknown germline . no 246 .
srip23981 chr12 79338030 79338030 - unknown germline . no 246 SYT1
srip26373 chr12 126802936 126802936 - unknown germline . no 246 .
srip27354 chr13 27488117 27488117 + unknown germline . no 246 .
srip27498 chr13 28033872 28033872 . unknown germline . no 246 .
srip27994 chr13 42771396 42771396 + unknown germline . no 246 DGKH
srip29674 chr13 63439264 63439264 . unknown germline . no 246 .
srip30637 chr13 78693217 78693217 + unknown germline . no 246 .
srip30987 chr13 79259790 79259790 - unknown germline . no 246 .
srip31978 chr13 86340151 86340151 - unknown germline . no 246 .
srip33544 chr13 104296230 104296230 - unknown germline . no 246 .
srip35197 chr14 28301256 28301256 + unknown germline . no 246 .
srip37340 chr14 59220394 59220394 + unknown germline . no 246 .
srip38310 chr14 77707274 77707274 - unknown germline . no 246 TMEM63C
srip39068 chr15 22574170 22574170 + unknown germline . no 246 .
srip39580 chr15 34429226 34429226 . unknown germline . no 246 .
srip41763 chr15 66684605 66684605 . unknown germline . no 246 MAP2K1
srip42531 chr15 83551628 83551628 - unknown germline . no 246 HOMER2
srip43261 chr15 100931152 100931152 - unknown germline . no 246 .
srip43424 chr15 101753511 101753511 . unknown germline . no 246 CHSY1
srip43475 chr16 5580955 5580955 + unknown germline . no 246 .
srip45192 chr16 32525616 32525616 - unknown germline . no 246 .
srip45513 chr16 33992437 33992437 . unknown germline . no 246 .
srip46001 chr16 70865430 70865430 . unknown germline . no 246 HYDIN
srip46367 chr16 73473822 73473822 + unknown germline . no 246 .
srip47703 chr17 32813627 32813627 + unknown germline . no 246 .
srip47926 chr17 40565587 40565587 . unknown germline . no 246 PTRF
srip48160 chr17 64637284 64637284 + unknown germline . no 246 PRKCA
srip50189 chr18 50097749 50097749 - unknown germline . no 246 DCC
srip50364 chr18 51425734 51425734 - unknown germline . no 246 .
srip50388 chr18 51488332 51488332 - unknown germline . no 246 .
srip50984 chr18 59579968 59579968 + unknown germline . no 246 .
srip52036 chr19 16671691 16671691 + unknown germline . no 246 SLC35E1
srip52350 chr19 29223829 29223829 . unknown germline . no 246 .
srip52821 chr2 10776567 10776567 . unknown germline . no 246 NOL10
srip52866 chr2 12791352 12791352 - unknown germline . no 246 .
srip54413 chr2 41913656 41913656 - unknown germline . no 246 .
srip55016 chr2 61475329 61475329 . unknown germline . no 246 USP34
srip55035 chr2 65744705 65744705 . unknown germline . no 246 .
srip55705 chr2 78992027 78992027 . unknown germline . no 246 .
srip56782 chr2 105252510 105252510 - unknown germline . no 246 .
srip57854 chr2 133033343 133033343 . unknown germline . no 246 .
srip58562 chr2 144010786 144010786 + unknown germline . no 246 ARHGAP15
srip59257 chr2 150489650 150489650 + unknown germline . no 246 .
srip60682 chr2 185694649 185694649 + unknown germline . no 246 ZNF804A
srip62125 chr2 221503759 221503759 . unknown germline . no 246 .
srip62474 chr2 233292147 233292147 . unknown germline . no 246 .
srip62625 chr2 235519802 235519802 + unknown germline . no 246 .
srip63060 chr20 7292193 7292193 + unknown germline . no 246 .
srip64045 chr20 25895497 25895497 - unknown germline . no 246 .
srip64770 chr20 41952105 41952105 - unknown germline . no 246 .
srip65421 chr21 10788057 10788057 . unknown germline . no 246 .
srip65424 chr21 10814473 10814473 . unknown germline . no 246 .
srip65433 chr21 11139607 11139607 . unknown germline . no 246 .
srip67265 chr22 22331915 22331915 . unknown germline . no 246 TOP3B
srip68280 chr22 37127112 37127112 - unknown germline . no 246 .
srip68755 chr22 44324597 44324597 - unknown germline . no 246 PNPLA3
srip70353 chr3 20090525 20090525 - unknown germline . no 246 KAT2B
srip70662 chr3 22739172 22739172 . unknown germline . no 246 .
srip71074 chr3 26524455 26524455 - unknown germline . no 246 .
srip73390 chr3 59852896 59852896 + unknown germline . no 246 FHIT
srip74026 chr3 79216306 79216306 + unknown germline . no 246 ROBO1
srip75287 chr3 84593281 84593281 - unknown germline . no 246 .
srip75958 chr3 90448018 90448018 . unknown germline . no 246 .
srip77890 chr3 139044434 139044434 + unknown germline . no 246 .
srip78637 chr3 151148546 151148546 - unknown germline . no 246 MED12L
srip80343 chr3 176091325 176091325 + unknown germline . no 246 .
srip83000 chr4 18162684 18162684 - unknown germline . no 246 .
srip84684 chr4 47007785 47007785 - unknown germline . no 246 .
srip85374 chr4 57497058 57497058 - unknown germline . no 246 .
srip85492 chr4 58126670 58126670 - unknown germline . no 246 .
srip86163 chr4 66413931 66413931 + unknown germline . no 246 EPHA5
srip87040 chr4 71093306 71093306 + unknown germline . no 246 C4orf7
srip90793 chr4 120717535 120717535 - unknown germline . no 246 .
srip90895 chr4 124630700 124630700 . unknown germline . no 246 LOC285419
srip92198 chr4 134596423 134596423 + unknown germline . no 246 .
srip92849 chr4 138413559 138413559 - unknown germline . no 246 .
srip96080 chr5 8749521 8749521 + unknown germline . no 246 .
srip96830 chr5 20555539 20555539 - unknown germline . no 246 .
srip96931 chr5 21873984 21873984 . unknown germline . no 246 CDH12
srip97749 chr5 33633341 33633341 - unknown germline . no 246 ADAMTS12
srip98663 chr5 51298602 51298602 - unknown germline . no 246 .
srip99049 chr5 54069194 54069194 - unknown germline . no 246 .
srip103784 chr5 137014782 137014782 - unknown germline . no 246 KLHL3
srip104851 chr5 154873935 154873935 - unknown germline . no 246 .
srip107069 chr6 13191024 13191024 + unknown germline . no 246 PHACTR1
srip107516 chr6 13503042 13503042 + unknown germline . no 246 .
srip108707 chr6 46310298 46310298 + unknown germline . no 246 .
srip109170 chr6 58481772 58481772 - unknown germline . no 246 .
srip110673 chr6 77379930 77379930 - unknown germline . no 246 .
srip111060 chr6 77980645 77980645 - unknown germline . no 246 .
srip112712 chr6 102283763 102283763 - unknown germline . no 246 GRIK2
srip113024 chr6 115109877 115109877 - unknown germline . no 246 .
srip113509 chr6 132615348 132615348 - unknown germline . no 246 .
srip113623 chr6 138108182 138108182 + unknown germline . no 246 .
srip114772 chr6 148195798 148195798 + unknown germline . no 246 .
srip114902 chr6 154707199 154707199 + unknown germline . no 246 .
srip116036 chr7 2407477 2407477 . unknown germline . no 246 EIF3B
srip116061 chr7 5787402 5787402 + unknown germline . no 246 RNF216
srip116255 chr7 12725156 12725156 + unknown germline . no 246 .
srip116300 chr7 17094708 17094708 + unknown germline . no 246 .
srip116817 chr7 38975502 38975502 - unknown germline . no 246 .
srip117707 chr7 56305348 56305348 - unknown germline . no 246 .
srip117711 chr7 57556083 57556083 . unknown germline . no 246 .
srip118314 chr7 62492949 62492949 . unknown germline . no 246 .
srip119644 chr7 84901716 84901716 - unknown germline . no 246 .
srip121021 chr7 102145134 102145134 . unknown germline . no 246 RASA4B
srip121022 chr7 102244294 102244294 . unknown germline . no 246 RASA4
srip121729 chr7 107829256 107829256 + unknown germline . no 246 NRCAM
srip122269 chr7 110484750 110484750 + unknown germline . no 246 IMMP2L
srip122640 chr7 122124551 122124551 + unknown germline . no 246 CADPS2
srip122980 chr7 129227639 129227639 . unknown germline . no 246 .
srip123145 chr7 137225508 137225508 + unknown germline . no 246 DGKI
srip123331 chr7 142818659 142818659 + unknown germline . no 246 .
srip123688 chr7 149765883 149765883 + unknown germline . no 246 .
srip124084 chr8 4452901 4452901 - unknown germline . no 246 CSMD1
srip124379 chr8 5829282 5829282 - unknown germline . no 246 .
srip125042 chr8 20538203 20538203 - unknown germline . no 246 .
srip125441 chr8 24926547 24926547 - unknown germline . no 246 .
srip125878 chr8 50448540 50448540 . unknown germline . no 246 .
srip128025 chr8 83740686 83740686 + unknown germline . no 246 .
srip128297 chr8 87315042 87315042 + unknown germline . no 246 .
srip129411 chr8 115881775 115881775 + unknown germline . no 246 .
srip129965 chr8 128533840 128533840 + unknown germline . no 246 .
srip130126 chr8 131041227 131041227 + unknown germline . no 246 .
srip130591 chr9 5023897 5023897 - unknown germline . no 246 JAK2
srip131722 chr9 18584286 18584286 + unknown germline . no 246 ADAMTSL1
srip132356 chr9 30495884 30495884 - unknown germline . no 246 .
srip132569 chr9 30674459 30674459 - unknown germline . no 246 .
srip133393 chr9 32463891 32463891 - unknown germline . no 246 DDX58
srip133633 chr9 34904794 34904794 - unknown germline . no 246 .
srip133901 chr9 71178843 71178843 . unknown germline . no 246 .
srip133960 chr9 72777416 72777416 - unknown germline . no 246 LOC100507244;MAMDC2
srip134064 chr9 75218778 75218778 - unknown germline . no 246 TMC1
srip134714 chr9 101561004 101561004 . unknown germline . no 246 .
srip135094 chr9 105073669 105073669 . unknown germline . no 246 .
srip136871 chrX 33425663 33425663 + unknown germline . no 246 .
srip137354 chrX 55264659 55264659 - unknown germline . no 246 .
srip140804 chrX 119892837 119892837 - unknown germline . no 246 .
srip142036 chrX 143761608 143761608 . unknown germline . no 246 .
srip142264 chrY 10064089 10064089 - unknown germline . no 246 .
srip142323 chrY 13869857 13869857 . unknown germline . no 246 .